Playing God: Eradicating Malaria and Mosquitoes in the Developing World with Gene Drives and CRISPR/Cas9
Lucas
Agudiez Roitman1*, Daniel Fisher2, Julie Theriot3
2Department of
Applied Physics, Stanford University, USA
3Department of Biochemistry,
and of Microbiology and Immunology, Stanford University, USA
Citation: Roitman LA, Fisher D, Theriot J (2017) Playing God: Eradicating Malaria and Mosquitoes in the Developing World with Gene Drives and CRISPR/Cas9. J Nanomed Nanosci: JNAN-127. DOI: 10.29011/JNAN-127. 100027
1. Abstract
Malaria
is one of the leading causes of death in many African nations, and it is one of
the top humanitarian problems. There are charities such as Against Malaria
Foundation that attempt to reduce
malaria infections in humans by distributing bed nets that are protected with
insecticides. Each bed net costs about $5 USD to distribute. Their
cost-efficiency is estimated to be of around $3k US dollars per life saved.
However, they also prevent developmental problems in children that are affected
but do not die from the disease. There are also network effects where if most
of the population uses bed nets, they make it less likely for other people in
the community to get infected as well. One problem with this approach is that
the costs remain high and governments are not channeling enough funds to
solving this problem. Nevertheless, this is the most effective charity in the
world in terms of improving wellbeing, preventing deaths, and decreasing
suffering, relative to financial cost. However, mosquitoes could be building up
resistance to the insecticides, and therefore other approaches need to be
explored. New research has been done on genetically engineering mosquitoes to
replace existing populations, making them immune to malaria and other viruses.
This could be done with or without gene-drive
and CRISPR/Cas9 as tools to modify mosquitoes. Other approaches being
researched include exterminating one or all mosquito species. The advantages
and disadvantages will be discussed on this paper, along with quantitative
estimates for the potential environmental impact, human-life-saving capability
and amounts of mosquitoes that would need to be released and how long it would
take to achieve the goal, whether it is immunity to malaria or extermination.
1. Introduction
I initially started researching about
applying CRISPR/Cas9 to eliminate lung and breast cancer, but finally ended up
realizing that the existing methods can only cure some types and do not totally
prevent or eliminate cancer. In living patients, treatments are very limited
and involve modifying white cells from a person to make them be able to detect
and attack some cancerous cells, and then re-injecting them back into their
bloodstream. For newborn babies, one can modify the fertilized egg in vitro to
have the person grow up with an enhanced genetic code that would render them
immune to some types of cancer. However, we are not yet able to cure all types
of cancer, even with total control of the genetic code. We can only cure or
prevent a few types of cancers. On the other hand, there are diseases that we
could possibly prevent or cure almost entirely with much less effort. Some of
those cases are diseases carried by mosquitoes, such as dengue, Zika, malaria,
Ebola and others.
Malaria, according to GiveWell is “One of
the leading killers of children” in Africa [1]. Givewell
ranks all charities that exist in the world, and tries to quantitatively
estimate which ones can produce the most good if they received additional
donations. This is a widely-accepted ranking within the Effective Altruism
community, which tries to apply altruism or charitable behavior in the most
effective manner [2]. Against Malaria Foundation is the top charity in Givewell’s top charities
chart. It uses charity funds to distribute “Insecticide-treated nets” that
prevent deaths and other cases of malaria [1]. It
pays about $5 USD per net. There is a network effect: the more widespread the
nets are, the less likely everyone will get infected by malaria. The disease,
malaria, is often transmitted by an “Infected female Anopheles mosquito”. The mosquito’s
saliva has parasites that are introduced into a person’s blood when the mosquito
bites them [3]. Parasites move to the liver to
mature and then reproduce. However, huge amounts of funding are currently
dedicated to fighting malaria in this way (with bed nets), and the problem has
not been fully solved yet. Moreover, Givewell suggests that “Insecticide
resistance is a growing concern”, although “It Remains difficult to quantify
the impact of resistance” [4]. Their cost-effectiveness
is of about $3k USD per life saved by using long-lasting insecticide-treated bed
nets [4]. The cost is more than justified, but
there could be cheaper methods (although riskier ones), such as modifying
mosquitoes to make them resistant to malaria or eliminating almost all mosquitoes
from the earth [5]. Half of the people in the
world have risks of having malaria [6]. In 2015 alone, there were around 212 million cases of
malaria and half a million deaths estimated [6].
Since 2010, there was a reduction of 29% in mortality rates from malaria [6]. 90% of the cases are in Sub-Saharan Africa [6].
2. Reproductive-advantage methods
There exists a naturally-occurring
bacterium that can block the development of malaria parasites in mosquitoes [7]. It is called Wolbachia, and female insects can be transmitted
to her offspring, while females that are not infected cannot produce viable
eggs when mating with infected males. This gives infected
females a “Reproductive advantage and helps the bacteria spread quickly [7]. Wolbachia has already been successfully used for
controlling dengue in a field trial, but the bacteria (Wolbachia) does not really
consistently move from mother to offspring in the malaria-carrying
cells and then,
once developed, they break mosquito species: Anopheles mosquitoes [7]. However,
researchers at Michigan State University have recently found a way to inherit Wolbachia
infections in Anophele
mosquitoes stably among multiple generations.
This could block the growth of malaria parasites [8].
They were able to persist the infection for at least 34 generations [7]. With only 5%
of the population being Wolbachia-infected females, all of the mosquitoes
became infected within 8 generations [7].
3. Potential Human Lives Save
3.1. Zika
Brazilian authorities have estimated between 497593 and 1482701 cases of Zika virus in the year the Zika outbreaks began. That is 105-6cases only in Brazil. Other countries have not been affected to that extent. There are no reported deaths from Zika. However, the birth defects seem to be dangerous, although rare, and they happen when an infected mother gives birth.
3.2. Ebola
During the 2014 Ebola outbreak, there were a total of 11310 deaths [9]. Guinea: 2544 + Sierra Leone: 3956 + Liberia: 4810 = 11310 [9]. That is 104.
3.3. Dengue
For dengue, one recent estimate indicates 390 million yearly infections, with 95% credibility: an interval of 284-528 million. That is in the order of 10212-223 infections per year. From those, 96 million (67 to 136 million) are clinically manifested (cause noticeable problems). The total amount of reported deaths from dengue in 2015 was of 1181. That’s 103.
3.4. Malaria
We can attempt to estimate the number of lives that could be saved by eliminating mosquitoes. Not only are mosquitoes the carrier of malaria, but also of dengue, Zika, and Ebola, as well as other diseases. 438,000 people (5×105) lives are lost to malaria every year [10]. The range is: 367,000-755,000. Therefore, in the order of 10512-6. 3 out of 5 of those are children (so they lose more years in their life from malaria compared to other diseases that target the elderly).
3.5. Total
In total, there were in the order of 104 deaths from Zika, Ebola and Dengue together. However, there are 5×105 lives lost to malaria every year, consistently. The developmental problems of children affected by Malaria also far outweigh those of the other viruses. For every year that we wait before we release the modified mosquitoes, we are losing half a million lives. Additionally, there are “200 million cases of the disease every year” [10]. This is 2×108 people who are affected but do not die.
4. Regulatory Hurdles
Because mosquitoes heavily
disproportionately affect people in African countries and others that are close
to the equator, and those countries are often under-developed, they have little
weight in international regulations and decisions. Therefore, despite malaria
affecting roughly 212 million people per year and killing 429000, since the
affected populations are not very influential, they do not have much weight
in the decision to exterminate
mosquitoes or making them immune. The risks to the environment are extremely
hard to estimate. These risks can affect already-developed areas (such as the
US or Europe), while very few people in those nations are affected by the
disease. Therefore, researchers, regulators and environmentalists have strong
incentives to prevent experimentation and attempts to eradicate the disease.
They would be directly impacted by any consequences, while the program would
mostly save lives in other nations. As we can see, most viruses that the media
portrays as emergencies (Zika, dengue, Ebola) are actually at least an order of
magnitude less impactful than Malaria. However, they impact more developed
nations, while Malaria does not. Current
methods of control for mosquitoes are already controversial because of the unintended
impact of pesticides on other insect species, even though they do not use
genetic modifications [11]. The chemicals might
also be harmful to humans [11].
5. Largest Field Experiments
5.1. Grand Cayman Islands
Oxitec performed a field trial in the Grand Cayman Islands, and reduced a particular species of mosquito by 80%. However, the remaining population could possibly build resistance and mutate to avoid dying before adulthood [12].
5.2. Panama
In Panama, Oxitec reported in 2014 that they reduced A. aegypti mosquitoes by 90%, 6 months after they released the genetically modified males [12].
5.3. Brazil
In the case of the Zika epidemic, in
Brazil, no deaths were reported. However, perhaps because it happened during
the Olympic games and many tourists from developed nations were present, an
attempt to significantly reduce the mosquito population was carried out. Oxitec,
a company from the United Kingdom, released genetically modified mosquitoes in
Brazil. It did not use gene-drives, but
they used a system that released mosquitoes with a dominant lethal gene, which turns
males sterile [13]. Oxitec designed their mosquitoes to carry the gene and are bred
in the presence of an antibiotic, so that they
can survive, then mate, and their offspring will not survive the larval
phase because they are not in the presence of tetracycline, the antibiotic.
Male mosquitoes do not bite people, and thus they do not spread the virus [12]. However, when they mate with wild-type females,
their offspring will also die before becoming adults [12]. In
three different cities in Brazil, the mosquito populations were reduced by 92%,
94% and 99%.
Oxitec released 800000 (~106) insects per week, for half a year. That’s a total of 4×6×800000 = 19200000 = ~107 insects in total. And they achieved a 90% decrease in the local population of mosquitoes.
6. Limitations of Dominant-Gene Based Methods
One of the biggest problems of this approach used in Panama, Cayman Islands and Brazil, is that Oxitec’s method is only effective in the first generation. After that, more genetically-modified mosquitoes will have to be produced and released periodically. Otherwise, there will likely be rebounds in the number of mosquitoes and those that survived will repopulate the world. Moreover, they could build resistance to this approach.
7. Timeframes with Reproductive Advantage Methods
We can attempt to estimate the timeframe after which mosquitoes could become immune to malaria. Mosquitoes have been in the earth for 210 million years, and the consequences of their extinction are unpredictable. Therefore, this approach of making mosquitoes immune to malaria could be less harmful to the environment than the complete elimination of mosquitoes. Some people estimate there are 100 quadrillion mosquitoes [14]. That is 1017. Others estimate 70 quadrillion [15]. That’s 7×1016. And that’s 107 mosquitoes for every human on earth. If we were going to infect mosquitoes with Wolbachia, which makes them immune to malaria, it would take 8 generations of female mosquitoes if we release 5% of the existing population in genetically modified mosquitoes. That would be 1015 mosquitoes released to exterminate them in about 8×7=56 weeks (1 year). This is based on the trials, in which with only 5% of the population being Wolbachia-infected females, all of the mosquitoes became infected within 8 generations [31].
The impact on the environment of making
mosquitoes immune to malaria might be minimal, because only one species is
targeted, and the edited mosquitoes can be safely eaten by predators [16]. There was another study,
at UC: Irvine, where researchers have used CRISPR/Cas9 in order to engineer mosquitoes
that were resistant to malaria [17]. This
could possibly allow for maintaining the existing population of mosquitoes
(thus minimizing environmental impact), while still eliminating the threat of
malaria to humans. Other researchers at Imperial College of London have
engineered a modified female mosquito that could mostly breed male mosquitoes.
This was done by using CRISPR/Cas9, the editing system, in order to cut the
female chromosome. This would offset sex ratios and possibly cause the
population to collapse [18].
However, the existing trials in Brazil were only performed with 107 mosquitoes, which is 8 orders of magnitude below what’s needed for infection within 8 generations, using Wolbachia. Extrapolating, we could estimate that releasing 107 mosquitoes that are immune could result in 109 immune mosquitoes after 8 generations, and 1011 in 16 generations. 1013 in 24 generations, 1015 in 32 generations, and 1017 in 40 generations, in the best case. Since a generation is 7 weeks on average, that would take 40×7=280 weeks, or 5.4 years. It would take more than 5 years to achieve immunity in all mosquitoes in the world, as a rough estimate, assuming we could apply this to all species. Whether attempting to exterminate mosquitoes or just making them immune to disease, reproductive-advantage-based approaches might be too slow.
8. Timeframe for Gene-Drive Methods
Gene-drive is a method that ensure all offspring by a genetically-modified mosquito will carry the modified gene [19]. This is achieved by cutting the other allele, and repairing it to copy the same gene (the target gene). Therefore, both copies are now the same type. As seen on the image
the method achieves almost total
inheritance, while normally only half of the offspring would inherit the gene.
This is quite important when releasing a small percentage of mosquitoes into
the wild population, since they need to very quickly spread their genes to the
whole population in order to achieve human goals such as mosquito extermination
or almost total immunity to malaria and other
viruses. Female mosquitoes can lay up to 300 eggs at a time, and they
lay eggs up to 3 times before they die [19]. The average mosquito lifespan is of two months [19]. Males usually live up to 10 days, and females
live about 6 to 8 weeks [19]. hey lay eggs every three days [19]. Those species that
hibernate may live up to six months [19]. Given that females can lay 300 eggs, 3 times in their
lifespan, we can estimate they can produce ~1000 offspring, or 103.
Therefore, if we started with 107
mosquitoes, after 1 generation we could have up to 1010 mosquitoes that carry the selfish genes,
after 2 generations, we would have 1013,
1016 after 3 generations, and 1019 (more than all existing mosquitoes) could be
reached after 4 generations. Since every generation of female mosquitoes is
about 7 weeks, it would take 28 weeks, or about half a year. This method is
much faster and more effective. It is 10 times faster than infecting mosquitoes
with Wolbachia
to achieve malaria immunity. However, some environmentalists believe that it is
impossible to predict the consequences of eliminating an entire species [20].
9. Non-Deadly Impacts of Mosquito-Carried Disease
The Zika virus is one of the most
dangerous, as it produces severe birth defects for mothers that are bitten.
However, no deaths have been reported. Not all impacts are deaths. This virus
has even reached New York (5 people have been diagnosed as positive there) [11].
These mosquitoes can also carry
dengue and chikungunya, as well as malaria and zika. The economic impact of
dengue fever in a single country (Brazil) was to be of $1.35 billion per year [21]. This is in the order of 109 USD. Authorities have been attempting to
develop vaccines and attack the virus instead of its host (mosquitoes) [22]. However, a vaccine or cure for Zika could potentially
take in the order of 10 years [23]. This time for research not
only could affect more humans, but also takes
research funds and resources for a problem
that could more easily and
definitively solved with gene-drive or other
methods.
10. Arguments in Favor of Total Mosquito Eradication
Although malaria-resistant gene drives
seem to cause no predictable harm to the environment, and are likely safe, we
might not be able to make mosquitoes immune to every disease, and thus they
might continue to carry other diseases than malaria, such as new diseases [24]. Moreover, it might be impossible to create gene
drives that “Encode antibodies to all of these diseases” [25]. If
a cell needs to create non-essential proteins such as antibodies, this will use
resources that might otherwise have been used for cell replication and growth,
and thus these cells would be selected against other cells with less load, and the organism would eventually develop without those
antibodies [26]. Also, other species
of mosquitoes could eventually start
carrying malaria, so even if one species becomes immune, others might mutate
and replace it as carriers [27].
11. Ecological Impact Estimates of Eradication
Although mosquitoes are believed to
pollinate some plants, there are very few studies of mosquitoes acting as pollinators
[25]. They function mostly as “Necrophages”, that is they consume nectar
but are not very helpful in pollination
[28].
Another common argument is that mosquitoes might be a food source to
birds, fish and amphibians, and those could be
impacted by removing mosquitoes [29]. Some
estimates by scientists estimate a 50% reduction of migratory bird populations that
rest in the tundra, in the Arctic [29]. However,
mosquitoes do not show up in birds’ stomachs in high amounts, and therefore
some believe they are not a primary food source [29]. Also,
after an initial short-term transitory phase of reduced fish, bird and
amphibians, there could be an increase in them, since mosquitoes could get
replaced by other insects as food sources [27]. Environmental
impact is not very well understood, and there is a widespread agreement that
the consequences of eliminating mosquitoes would be quite unpredictable,
although the evidence suggests they are not immediately essential to the
survival of any species.
12. Conclusion
Although
the environmental impact
of eliminating all malaria-carrying mosquitoes or even all
mosquitoes is unpredictable, it might be worth the risk if we can save around 5
million lives in the next decade, as well as
preventing suffering from non-lethal cases. However, intermediary approaches
could be attempted first, such as spreading immunity to malaria and other
diseases via CRISPR/Cas9-engineered mosquitoes and gene-drive. These changes
could potentially be reversible with more CRISPR/Cas9 modifications and another
gene-drive worldwide experiment. Eventually, if mosquitoes develop resistance after
the fact, and become malaria-carriers again, total extermination could be
attempted. In any case, gene-drive seems much more promising than approaches
based on reproductive-advantage for spreading genes among the population.
Gene-drive can achieve a broader effect (~95%
vs. 80-90%), ten times faster (half a year vs. more than 5 years).
Figure-1
Figure-2
Figure-3
Figure-4
Figure-5
Figure-6
Figure-7
Figure-8
Figure-9
Figure-10
Figure-11
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Image: malaria parasites
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How Many
Mosquitoes Are There in the World?
15.
How Many
Mosquitoes Are There? Is It Even Possible to Estimate Such a Thing?
19.
Saey, Hesman T
(2016) Gene Drives Spread Their Wings. Science News. Mosquito Facts.
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